Hi all,
We now have a prototype for support of gap junctions via NESTML.
The code is being tested right now on the "iaf_psc_exp" (linear dynamics) and "aeif_cond_exp" (nonlinear dynamics) neuron models and can be found at https://github.com/nest/nestml/pull/907
The pull request is still in a draft stage; some documentation still needs to be added, but most of all I would like to have more strict numerical validation of the results. If anyone could recommend some simple systems (for instance, involving only two neurons connected by one gap junction), in particular those that have a closed-form algebraic solution of the dynamics, or those that converge to a known solution under a set of representative conditions, this would be much appreciated.
Please let me know if you run into any trouble running the prototype!
With kind regards, Charl
On Tue, Mar 14, 2023, at 11:10, bstrohmer@gmail.com wrote:
Hi everyone, has anyone successfully added a gap junction to an existing model using NESTML? I would like to add gap junction support to the aeif_cond_alpha neuron model but it is unclear how this can be done within NESTML. As suggested by Charl, I started to look into updating the jinja templates but I am not sure this will be possible since both the input/output of the neuron and the model's equation must be updated to support gap junctions. If anyone has any suggestions or if anyone has NESTML code for adding a gap junction to an existing model, I would be very appreciative. Thanks! _______________________________________________ NEST Users mailing list -- users@nest-simulator.org To unsubscribe send an email to users-leave@nest-simulator.org