Hi Charl, Yes, I actually started out in NESTML and was able to integrate a new neuron model in NEST so it worked really well. Unfortunately, I need to add gap junction support to my neuron model which is why I was forced to code "by hand".
On Fri, Jan 13, 2023 at 2:41 PM Charl Linssen nest-users@turingbirds.com wrote:
Hi,
This is not addressing your actual question, but I just wanted to check whether you know about NESTML for writing custom neuron models ( https://nestml.readthedocs.org/) and whether there were any reasons you might prefer to write the model "by hand" in C++ (there certainly might be! Just curious.)
With kind regards, Charl
On Fri, Jan 13, 2023, at 14:38, bstrohmer@gmail.com wrote:
I would like to install a custom neuron model in NEST so I followed the instructions for the nest-extension-module. It is able to build the .so files but it errors during the final install of the project as seen in the below message.
Install the project... -- Install configuration: "" -- Installing:
/home/bs/git_repos/extension/nest-simulator/result/include/piftestmodule/pif_psc_alpha.h
-- Installing:
/home/bs/git_repos/extension/nest-simulator/result/lib/nest/piftestmodule.so
-- Installing:
/home/bs/git_repos/extension/nest-simulator/result/lib/nest/libpiftestmodule.so
Traceback (most recent call last): File "<string>", line 1, in <module> File
"/home/bs/git_repos/extension/nest-simulator/result/lib/python3.8/site-packages/nest/__init__.py",
line 444 err = AttributeError(f"Cannot set attribute '{attr}' on module 'nest'")
I am trying to install one of the example neurons provided first (pif_psc_alpha) so I do not expect that it is an issue within the source files. Thanks for any advice in correcting this issue! _______________________________________________ NEST Users mailing list -- users@nest-simulator.org To unsubscribe send an email to users-leave@nest-simulator.org
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